Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015856222.1_cds_XP_016513073.1_25651
CDS Infomation

[gene=LOC107830105] [db_xref=GeneID:107830105] [protein=transcription factor 25-like] [protein_id=XP_016513073.1] [location=complement(join(97639..97885,98199..99110,100689..101248,104958..105131))] [gbkey=CDS]
Sequence

ATGTCGGTTCGTTTGATGAAAAAAATCTTGAAAGAAAAGGAACAACCAGCTGAGCCTCAA
CAACTCATCAACAACAACGAAGAATCTGAATCTGAATCGCCTCCTCATTCTTCCGCTACC
TTTCGGAATCCATTCGATCTCCTTGACGACGAAGACGATGCTGTTGACGACCAGGAAAAC
AAGGCAGATAACGATGATGGATCCCCAATCCATAATAGCGATGAGAAGCAGTCCTTCACC
ACGAAAGCCACTCCTGAAGCATTTGTGTTGTCAGATAGCAAATTAAAGAAAAAGAAAAAG
AAGAAAAACAAGGAGAAGTCACAACCAAGAGTGGAGGATAATGAGAACTCTTGGAACGAG
TCATTAGAACAACTATCAATTAAAGATGATTCTTCTCATCTTGAGCATGTTGCTCACGAT
CCTGGAAAATCTAATACGACAAATTTAAATGGCAGAGGAAAAGTGGTCAAGCGGTGTACA
TCTTCCGTCTTACAAGTAGACCCGAAATTTCTTAATGCAGAAAACGAACTAAAAAGGATA
TTTGGTTCTAGAGTGGTAAATTCGTTTGAAAAAAGTCATCAAACTGGAAGTTCTAGACAA
CCAAGAGGCGGAAGACGTGGGAGCCAGAACCACCGGAAGACTATTATTGTTTCTCCTTTA
GAACATTGGCCAAGGTGGGATGGATCACTATCGATGGAGCTTGTGGAAACCAGAGATGGG
ATCTGTTATTTTAGGTATGTACATACATCATCCTACAGCCAAGCCCAGGAAGCATTTGAA
AGTGCTAAGGCAGTTCATGATTTTAATGGTATCGTGAATATTCTATTGCATCATCCATAT
CATGTTGAGTCACTCATTACATTAGCTGAATATTATAAATTCAGTGGTGAACATCAAATG
TCGGCTGATTGTACTGCAAGATGTCTGTATGCATTGGAATGTGCATGGCATCCACTGTTC
ACTCCTTTGATGGGCAATTGTCATCTTAAGTATAGTTGTGAAACCAACAAGCCATTGTTT
ACCGTGCTTTTCTCCCACATGAAAAACATGGATAGACGTGGCTGCCATCGGTCTGCTCTT
GAGCTTTGCAAATTATTGCTTCTACTAGATTCAGACGATCCAATGGGAGTCTTGTTCTGC
ATTGACTACTATTCTTTAAGAGCGGAGGAGTATACATGGCTTGAACAGTTCTCTGAGCAA
TATAAGAGTGATAATTCTTTGTGGTTATTTCCAAATTACTCCTATTCTCTTGCCGTGTGC
CGTTACTATGTTGAAAATGAGGAACATGCTAAAGATATAACGACAGATAATTTAAAAGCT
TCTGCAACAGATATCATGAAGCAGGCATTGATGTTACATCCTTCAGTCTTGAAAAAGCTA
GTGTCGAAGGTACCGTTGAAGGATAAAGCCTGGACTAGCATAATCAAGCACAAGTTCTTT
AGCTCTGATCAAACAGGAACACCTTCCTTGGATCACTTGATCAATATATATGTTGAAAGG
AGCTACCTTATATGGAGGCTTCCTGATCTCCAGAAGTTTGTTAGGGATTCTGCACTTTCA
GTAATTGAGACACTGCAGAATGACGGAAATGATGCCGGAGACTGGATGTGTGTGCGAAAA
GAAGCTTTTTCATCTGAGAAAAATGAGTATTCTCACTTGCTGGTATCAGATTTCTCTGAT
TCAGTTCCGACTTTGCCTCCTGATAACCTGCAAAACTTCATGGTTGACCCGAGGAGAGAG
GTGCCAAATGATGCACAACCTGCAAACAACCGTGTCCAAGATTTGTCTGATCGAAATGCA
ATTGCTGTCTTGCTCGAGTCTATGTTACCGTGGATTAATTATGGTTCTGGCCATGACCAG
CTTGATCATGATGAGCAGGCTAATGATGGATAG

Peptide Sequence

PEP ID

XP_016513073.1
PEP Infomation

PREDICTED: transcription factor 25-like [Nicotiana tabacum]
Sequence

MSVRLMKKILKEKEQPAEPQQLINNNEESESESPPHSSATFRNPFDLLDDEDDAVDDQEN
KADNDDGSPIHNSDEKQSFTTKATPEAFVLSDSKLKKKKKKKNKEKSQPRVEDNENSWNE
SLEQLSIKDDSSHLEHVAHDPGKSNTTNLNGRGKVVKRCTSSVLQVDPKFLNAENELKRI
FGSRVVNSFEKSHQTGSSRQPRGGRRGSQNHRKTIIVSPLEHWPRWDGSLSMELVETRDG
ICYFRYVHTSSYSQAQEAFESAKAVHDFNGIVNILLHHPYHVESLITLAEYYKFSGEHQM
SADCTARCLYALECAWHPLFTPLMGNCHLKYSCETNKPLFTVLFSHMKNMDRRGCHRSAL
ELCKLLLLLDSDDPMGVLFCIDYYSLRAEEYTWLEQFSEQYKSDNSLWLFPNYSYSLAVC
RYYVENEEHAKDITTDNLKASATDIMKQALMLHPSVLKKLVSKVPLKDKAWTSIIKHKFF
SSDQTGTPSLDHLINIYVERSYLIWRLPDLQKFVRDSALSVIETLQNDGNDAGDWMCVRK
EAFSSEKNEYSHLLVSDFSDSVPTLPPDNLQNFMVDPRREVPNDAQPANNRVQDLSDRNA
IAVLLESMLPWINYGSGHDQLDHDEQANDG

Transcript Sequence

Gene sequence data has not been registered.